Using libxml2. Generating points along line with specifying the origin of point generation in QGIS. Connect and share knowledge within a single location that is structured and easy to search. asked CMake to find a package configuration file provided by "Python", but checking for sed /bin/sed Then running pkg-config --variable pc_path pkg-config gives (my highlighting): /usr/local/lib/x86_64-linux-gnu/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/lib/x86_64-linux-gnu/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig. Installing R package XML on MacOS 10.13.6 Warning message: To subscribe to this RSS feed, copy and paste this URL into your RSS reader. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI, Ubuntu 23.04 (Lunar Lobster) is now released and is no longer off-topic, Announcement: AI-generated content is now permanently banned on Ask Ubuntu, Found 'solutions' to "cannot find -lcrypto" are not working for me, Installation of i386 Deb(Hangul 2008) into AMD64 architecture; dpkg/library error, Testing CUDA in Ubuntu 16.04: /usr/bin/ld: cannot find -lnvcuvid. Asking for help, clarification, or responding to other answers. USE_XML2 = yes Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? So the other option left was to install from source. is a Web Designer and content creator. What does "up to" mean in "is first up to launch"? Browse other questions tagged. simplifying this part of the code base and improving error reporting. Can the game be left in an invalid state if all state-based actions are replaced? devtools::install("./XML", To subscribe to this RSS feed, copy and paste this URL into your RSS reader. no configure: error: "libxml not found" ERROR: configuration failed for package 'XML' rev2023.4.21.43403. like I said, libxml2 and libxml2-dev are already on the system. * Checking Irreducibility to a Polynomial with Non-constant Degree over Integer. Connect and share knowledge within a single location that is structured and easy to search. Ubuntu and the circle of friends logo are trade marks of Canonical Limited and are used under licence. thanks, which can be solved by installing, thanks, actually my issue was PKG_CONFIG_PATH wasn't setup correctly. It only mentions what their values should be, that is why I was curious how you knew that they should be called "LIBXML_CFLAGS" and "LIBXML_LIBS". How to check for #1 being either `d` or `h` with latex3? rev2023.4.21.43403. specify an appropriate LIBXML_LIBDIR if the libxml2 library is not in the default Can someone explain why this point is giving me 8.3V? Ongoing work on libxml2 relies on funding. For trying out wordpress 3.8 installation, i had to upgrade my php installation from 5.1.6 to 5.2.4 or later version. Stack Exchange network consists of 181 Q&A communities including Stack Overflow, the largest, most trusted online community for developers to learn, share their knowledge, and build their careers. Why can pkg-config not find gsettings-desktop-schemas? "configure: error: Package requirements (blkid) were not met" To reproduce your problem I installed Anaconda3 4.4.0 on RedHat 7.4, then: Use of this site constitutes acceptance of our User Agreement and Privacy long story short: if "/bin" is in your PATH, cmake doesn't work correctly. By clicking Sign up for GitHub, you agree to our terms of service and checking for gzopen in -lz yes Located parser file /home/***/anaconda3/include/libxml2//parser.h Asking for help, clarification, or responding to other answers. OnDebian/Ubuntu you can install using apt-get as shown in the below command: Ran into similar issue when trying to install PHP SOAP extension. @Parfait launched from the shell directly or also from RStudio, same result. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. Literature about the category of finitary monads. from /usr/include/libxml2/libxml/tree.h:1307, How to access WhatsApp through Chrome Web browser? Malicious files should be detected reliably now But i having problem with second command $ ./configure. from /home/patricaholden/williamson/testbuild/Pro3-Linux/packages/libiio/xml.c:23: -- Looking for strerror_r I've installed libxml2-dev in my Ubuntu 20.04 terminal (under WSL), as it's a requirement for pgModeler. conda install -c r r-xml. I had the same error but libxml2-dev was already installed so that didn't help. no checking for xmlParseFile in -lxml. So you have to specify the location of libxml2 when you run ./configure, just as brew and libvisio tell you to: (The paths on your system may vary, so do check! It doesn't mention the names "LIBXML_CFLAGS" and "LIBXML_LIBS" as far as I can see. It will still work most of the time, but might not suffice when the newer version of btrfs-tools has added new dependencies (like back in the day when mainline btrfs already supported some newer compression algorithm, but Debian's version . Easy way of installing it is using yum by issuing the following command on your CentOS/Fedora/RHEL Linux distributions. Would you ever say "eat pig" instead of "eat pork"? checking whether we are cross compiling no -- Check size of struct usb_functionfs_descs_head_v2 - done "Signpost" puzzle from Tatham's collection. I suspect that libusb is also being found in /usr/lib. -- Performing Test WITH_NETWORK_EVENTFD - Success @pcercuei correct me if I'm wrong here, but we don't really do anything special with libxml2 in cmake but rely on find_package. Looking for job perks? The version nodes are kept so it How to combine several legends in one frame? from /home/patricaholden/williamson/testbuild/Pro3-Linux/packages/libiio/xml.c:23: Checking directory of LIBXML_INCDIR Located parser file /opt/lampp/include/parser.h Checking for 1.8: /opt/lampp/include Using libxml2. Making statements based on opinion; back them up with references or personal experience. configure: error: xml2-config not found. ), I had this issue with PHP 7.4 build from source on Ubuntu 16.04 which I fixed by using the same way for OSX suggested above + installing dev package for libxml2-dev. It is the XML support library, and required for HTML and XML support in Emacs. If pkg-config Thanks! Why does contour plot not show point(s) where function has a discontinuity? "No package libxml-2.0 installed" - Linux Mint Forums checking for suffix of object files o You signed in with another tab or window. Make sure it is in your PATH or set the PKG_CONFIG environment variable to the full path to pkg-config. is not working in on the command line for Visual Studio Code on OS X/Mac. make[2]: *** [CMakeFiles/iio.dir/xml.c.o] Error 1. What is this brick with a round back and a stud on the side used for? No package 'libxml-2.0' found Are there any canonical examples of the Prime Directive being broken that aren't shown on screen? Why xargs does not process the last argument? On what basis are pardoning decisions made by presidents or governors when exercising their pardoning power? See on the CRAN page https://cran.r-project.org/web/packages/XML/index.html SystemRequirements: libxml2 (>= 2.6.3) You need to install it before installing the R package. does it work when you pass the location of the lib to the script? from /usr/include/libxml2/libxml/tree.h:1307, Futuristic/dystopian short story about a man living in a hive society trying to meet his dying mother. I am also running into the failure when trying to cross-compile libraries. Policy. Could not find a package configuration file provided by "Python" with any Unexpected uint64 behaviour 0xFFFF'FFFF'FFFF'FFFF - 1 = 0? How a top-ranked engineering school reimagined CS curriculum (Ep. no checking for xmlParseFile in -lxml. headers, it was still possible to declare them manually. // . I've updated the README to explicitly mention this dependency. Connect and share knowledge within a single location that is structured and easy to search. [ 34%] Building C object CMakeFiles/iio.dir/local.c.o Understanding the probability of measurement w.r.t. macos - configure script cannot find libxml2 on mac - Stack Overflow The XInclude engine has been reworked to properly support nested includes. Generic Doubly-Linked-Lists C implementation. BLAS: /home/kkarius/anaconda3/lib/R/lib/libRblas.so from /usr/include/libxml2/libxml/globals.h:18, The best answers are voted up and rise to the top, Not the answer you're looking for? How can I start PostgreSQL server on Mac OS X? cmake --sysroot=${PWD}/../../../ubuntu-18.04.2-minimal-armhf-2019-02-16 ../ Scanning dependencies of target iio cmake --sysroot=${PWD}/../../ubuntu-18.04.2-minimal-armhf-2019-02-16 ../ As brew tells you when it installs libxml2: This means that brew is not symlinking libxml2 to /usr/local/lib and /usr/local/include, and likely not linking the pkg-config file there as well, which is why libvisio can't find it. -- Looking for stdint.h I started with a fresh copy of the LibIIO repo and re-ran cmake. Can someone explain why this point is giving me 8.3V? Content type 'application/x-gzip' length 1599437 bytes (1.5 MB) Learn more about Stack Overflow the company, and our products. Tikz: Numbering vertices of regular a-sided Polygon, Embedded hyperlinks in a thesis or research paper. Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Problems compiling libjingle/gtk+-2.0 for Mac OS X, XSP Configure fails due to mono module dependancy, Error libxml-2.0 not found when installing ggiraph, How to set path pygobject Macos catalina installing PyGTK, Having Trouble Downloading Tidyverse in R, "Signpost" puzzle from Tatham's collection. Generally to troubleshoot a configure problem, you should download the package tarball, run the installation, and inspect the config.log file. However I do have libxslt installed, e.g. [ 11%] Building C object CMakeFiles/iio.dir/device.c.o checking for gzopen in -lz no checking for sed /bin/sed -- Looking for pthread_setname_np - found >>Still the configure script stops with this erroe: >>checking for xmlSAXUserParseFile. Problems install R XML package on CentOS 7 - Bioconductor Trying to install the XML package as follows I get the error configure: error: "libxml not found". Yet there seems to be a problem with libxml2. -- Looking for sys/types.h I think there is a problem with the environment variables when you install R through conda. [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C Working PATH (for me): /usr/local/sbin:/usr/local/bin:/usr/bin:/var/lib/flatpak/exports/bin:/usr/lib/jvm/default/bin:/usr/bin/site_perl:/usr/bin/vendor_perl:/usr/bin/core_perl. Browse other questions tagged. xml2 installed but not found during compilation. How can I control PNP and NPN transistors together from one pin? Thanks for pointing this out as I've kind of been stuck on this for a bit trying to do it from CMake within my project. link errors with --no-undefined-version. [ 23%] Building C object CMakeFiles/iio.dir/utilities.c.o The header files and library seem to be [1] compiler_3.4.1 tools_3.4.1. [1] BiocInstaller_1.26.1, loaded via a namespace (and not attached): libffi: Unfortunately, however, this appears not to be the case for libxml2 for some reason. PHP configure error: xml2-config not found. Check libxml2 installation Why don'y you use the conda package for CRAN's XML (called r-xml)? rev2023.4.21.43403. The best answers are voted up and rise to the top, Not the answer you're looking for? Thanks for contributing an answer to Stack Overflow! [ 15%] Building C object CMakeFiles/iio.dir/context.c.o Why in the Sierpiski Triangle is this set being used as the example for the OSC and not a more "natural"? I'll play around with my PATH and see if I can get it going. The text was updated successfully, but these errors were encountered: The issue here isn't that you're missing xsltproc, but that you're missing the Autotools macro AX_PROG_XSLTPROC which looks for xsltproc. -- Looking for strdup If it detects the directory name as libxml instead of libxml2 it assumes you're using libxml1. If you have specified LIBXML_INCDIR, make certain to also Let me know if you have any further problems. Downloaded the latest stable version of php ie, 5.5.7 and started to compile. Does a password policy with a restriction of repeated characters increase security? * installing *source* package XML -- Performing Test HAS_O_TMPFILE Does a password policy with a restriction of repeated characters increase security? Using an Ohm Meter to test for bonding of a subpanel. About 90 memory errors in code paths handling malloc failures have been fixed. I have nearly no idea about cmake, so I probably didn't find out everything, but the file that gets created with the include path seems very wrong: These paths should be /usr/inlucde/libxml2. downloaded 1.5 MB, * installing *source* package XML Embedded hyperlinks in a thesis or research paper. checking whether we are using the GNU C compiler yes Protection against entity expansion attacks, also known as billion laughs memory pressure. installation of package XML had non-zero exit status, > sessionInfo() 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI, Ubuntu 23.04 (Lunar Lobster) is now released and is no longer off-topic, Announcement: AI-generated content is now permanently banned on Ask Ubuntu, Package libprotobuf was not found in the pkg-config search path, OpenSSL installed but no openssl.pc (needed by pkg-config), Can't install RMagick 4.0.0. checking whether gcc accepts -g yes What are the advantages of running a power tool on 240 V vs 120 V? I made sure xml2 and libxml2 are installed (via sudo apt-get install) but that's not enough. -- Check size of struct usb_functionfs_descs_head_v2 https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz (2.50M) What is scrcpy OTG mode and how does it work? # Install XML Excellent :-) Good luck with your project! Internal -- Found Git: /usr/bin/git (found version "2.17.1") "Python_DIR" to a directory containing one of the above files. issues see https://gitlab.gnome.org/GNOME/libxml2/-/issues/507, Powered by Discourse, best viewed with JavaScript enabled, https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz, https://gitlab.gnome.org/GNOME/libxml2/-/issues/507. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. CMake Warning at bindings/python/CMakeLists.txt:4 (find_package): What is this brick with a round back and a stud on the side used for? Worked fine on my manjaro machine with just the base-devel group installed. thank you so much. (Related homebrew issue: "libxml2 install path".). Configuration failed because libxml-2.0 was not found. "Signpost" puzzle from Tatham's collection. One other thing, changing the PATH produces following error with CMake: CMake Warning at CMakeLists.txt:289 (message): to your account. Making 'packages.html' done See the pkg-config man page for more details. I'm going to close this - as I think the cross problem is in a new thread. How to combine several legends in one frame? 2. Sign in of the following names: Add the installation prefix of "Python" to CMAKE_PREFIX_PATH or set Why does Acts not mention the deaths of Peter and Paul? Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, for libxml++2.6 sudo apt-get install libxml++2.6-dev. [ 5%] Building C object CMakeFiles/iio.dir/channel.c.o [ 30%] Building C object CMakeFiles/iio.dir/sort.c.o By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. -- Looking for sys/types.h - found * edition of libxml How about saving the world? Yes, i think it is looking for libxml-2.0.pc in /usr/lib/pkgconfig/ direcotry, but it is not there. Platform: x86_64-pc-linux-gnu (64-bit) R itself was installed using anaconda. checking whether we are using the GNU C compiler yes -- Found BISON: /usr/bin/bison (found version "3.0.4") This time, it was XML. linux - No package 'libxml-2.0' found - Stack Overflow Fix use-after-free in xmlParseContentInternal() (David Kilzer), xmllint: Fix use-after-free with --maxmem, parser: Fix OOB read when formatting error message, entities: Rework entity amplification checks, parser: Fix regression in xmlParserNodeInfo accounting, Fix memory errors in code handling malloc failures, xmlParseStartTag2() contains typo when checking for default definitions for, error: Make sure that error messages are valid UTF-8, xmllint: Validate --maxmem integer option, xmlValidatePopElement() can return invalid value (-1) (David Kilzer), parser: Rework EBCDIC code page detection, parser: Limit name length in xmlParseEncName, parser: Rework shrinking of input buffers, html: Rely on CUR_CHAR to grow the input buffer, parser: Rely on CUR_CHAR/NEXT to grow the input buffer, valid: Make xmlValidateElement non-recursive, html: Fix quadratic behavior in htmlParseTryOrFinish, xmllint: Fix memory leak with --pattern --stream, parser: Stop calling xmlParserInputShrink, xinclude: Fix quadratic behavior in xmlXIncludeLoadTxt, xinclude: Abort immediately if max depth was exceeded, parser: Lower entity nesting limit with XML_PARSE_HUGE, parser: Dont increase depth twice when parsing internal entities, parser: Improve detection of entity loops, parser: Only report a single entity error, libxml.h: Remove dubious definition of LIBXML_STATIC, encoding: Remove unused variable xmlDefaultCharEncodingHandler, parser: Merge misc, prolog and epilog cases in push parser, parser: Fix consumed accounting when switching encodings, html: Fix check for end of comment in push parser, parser: Fix push parser with 1-3 byte initial chunk, parser: Rewrite push parser boundary checks, reader: Switch to xmlParserInputBufferCreateMem, html: Dont escape ASCII chars in href attributes, parser: Dont call xmlSHRINK from push parser, parser: Ignore cdata argument in xmlParseCharData, parser: Rework push parser parser progress checks, io: Fix a few integer overflows in I/O statistics, io: Rework xmlParserInputBufferGrow with encodings, io: Check for memory buffer early in xmlParserInputGrow, parser: Fix error message in xmlParseCommentComplex, Bypass proxy in nanoHTTP for hosts in no_proxy (Markus Jrg), schemas: Fix infinite loop in xmlSchemaCheckElemSubstGroup, xinclude: Remove inefficient refcounting scheme, xmllint: Improve handling of empty XPath node sets, parser: Fix potential memory leak in xmlParseAttValueInternal, error: Dont use initGenericErrorDefaultFunc, xpath: Lower XPath recursion limit on Windows, Make xmlNewSAXParserCtx take a const sax handler, Remove internal macros from parserInternals.h, Move some HTML functions to correct header file, xmllint: Stop calling xmlSAXDefaultVersion, Introduce xmlNewSAXParserCtxt and htmlNewSAXParserCtxt, Dont mess with parser options in htmlParseDocument, Remove useless call to htmlDefaultSAXHandlerInit, Remove htmlDefaultSAXHandler from non-SAX1 build, Dont initialize SAX handler in htmlReadMemory, Fix htmlReadMemory mixing up XML and HTML functions, Dont use default SAX handler to report unrelated errors, Create stream with buffer in xmlNewStringInputStream, xzlib: Fix implicit sign change in xz_open, parser: Simplify calculation of available buffer space, parser: Use size_t when subtracting input buffer pointers, parser: Check for integer overflow when updating checkIndex, xpath: Fix harmless integer overflow in xmlXPathTranslateFunction, regexp: Add sanity check in xmlRegCalloc2, encoding: Cast toupper argument to unsigned char, buf: Fix return value of xmlBufGetInputBase, parser: Remove useless ent->etype test in xmlParseReference, parser: Remove useless ent->children tests in xmlParseReference, xmlexports.h: Disable docs for internal macro XMLPUBLIC, parser: Simplify xmlParseConditionalSections, io: Rearrange code in xmlSwitchInputEncodingInt, warnings: Fix -Wstrict-prototypes warning, warnings: Remove set-but-unused variables, Fix unused variable warning in python/types.c, Dont use sizeof(xmlChar) or sizeof(char), parser: Deprecate more internal functions, parser: Deprecate some parser input functions, parser: Deprecate xmlString*DecodeEntities, threads: Deprecate some internal functions, Generate deprecation warnings for old SAX API, Mark more functions setting globals as deprecated, autoconf: Warn about outdated C compilers, catalog.c: Silence a cast warning on VS 2022 (Luk Tyrychtr), xstc/fixup-tests.py: port to Python 3 (Ross Burton), xstc/fixup-tests.py: unify whitespace (Ross Burton), Remove hacky heuristic from b2dc5675 (Alex Richardson), Avoid creating an out-of-bounds pointer by rewriting a check, Correctly relocate internal pointers after realloc() (Alex Richardson), Visual Studio builds: Allow silencing deprecation warnings (Chun-wei Fan), Visual Studio: Define XML_DEPRECATED (Chun-wei Fan), sources: Silence C4013 warnings on Visual Studio (Chun-wei Fan), python/setup.py.in: Improve Windows import patching (Chun-wei Fan), Fix Windows compiler warnings in python/types.c, Fix libxml_PyFileGet with stdout on macOS, xmlexports.h: Remove LIBXML_FASTCALL optimization, Remove XMLCALL and XMLCDECL macros from public headers, Remove RPM build, Makefile.tests, README.tests, libxml.m4: deprecate AM_PATH_XML2, wrap PKG_CHECK_MODULES instead, libxml.m4: fix -Wstrict-prototypes (Sam James), cmake: Build static library with -DLIBXML_STATIC, autotools: Dont use version script on Windows, autotools: Only add network libraries if HTTP/FTP enabled, python: Dont output missing generators during build, Remove HAVE_WIN32_THREADS configuration flag, Use AM_CFLAGS and AM_LDFLAGS consistently, configure.ac: Remove checks for unused programs, Consolidate simple API modules in configure.ac, Fix dependency resolution in configure.ac, Cleanup distribution settings in Makefile.am, testchar: Add test for memory pull parser with encoding, fuzz: Also test init function of URI fuzzer, gitlab-ci: Enable all integer sanitizers, fuzz: Support variable integer sizes in fuzz data, fuzz: Fix duplicate detection in fuzzEntityRecorder, fuzz: Set filename in xmlFuzzEntityLoader, python/tests/reader2: use absolute paths everywhere (Ross Burton), python/tests/reader2: always exit(1) if a test fails (Ross Burton), testModule: exit if the module cant be opened (Ross Burton), CI: disable modules in gcc:static build (Ross Burton), tests: Check that xmlInitParser doesnt allocate memory, tests: Fix use-after-free in Python tests, gitlab-ci: Make Test-Msvc exit if ctest fails, gitlab-ci: Treat compiler warnings as errors on MSVC, test: Add test for push parser boundaries, gitlab-ci: Upgrade image to Ubuntu 22.10, reenable MSan, xinclude: Dont create result doc for test with errors, gitlab-ci: Allow cast-align warnings from clang, gitlab-ci: Move MSVC test to separate script, gitlab-ci: Consolidate CMake test scripts, gitlab-ci: Only install MinGW autotools if needed, gitlab-ci: Only install cmake MinGW package if needed, Disable fuzzer tests if glob.h wasnt found, html: Fix htmlInitAutoClose documentation, doc: Mention new location of XML catalog as breaking change, doc: Mention potentially breaking changes in NEWS, doc: Remove xmlDllMain from documentation and version script, doc: Document xmllint --nodict and --pedantic, Support comments for global variables in documentation, Dont index anything in DOC_DISABLE sections.
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